Referencesď
Y. Zhou, D. Chebotarov, D. Kudrna, and others. A platinum standard pan-genome resource that represents the population structure of asian rice. Scientific Data, 7:113, 2020. doi:10.1038/s41597-020-0438-2.
Nina Marthe, Matthias Zytnicki, and François Sabot. Grannot, a tool for efficient and reliable annotation transfer through pangenome graph. Peer Community Journal, 2025. URL: https://peercommunityjournal.org/articles/10.24072/pcjournal.651/, doi:10.24072/pcjournal.651.
K. Xu, X. Xu, T. Fukao, P. Canlas, R. Maghirang-Rodriguez, S. Heuer, A. M. Ismail, J. Bailey-Serres, P. C. Ronald, and D. J. Mackill. Sub1a is an ethylene-response-factor-like gene that confers submergence tolerance to rice. Nature, 442(7103):705â708, 206. doi:10.1038/nature04920.
Ryan R. Wick, Mark B. Schultz, Justin Zobel, and Kathryn E. Holt. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics, 31(20):3350â3352, 2015. doi:10.1093/bioinformatics/btv383.
Peng Qin, Haipeng Lu, Hongyang Du, Haili Wang, Weijie Chen, Zhenyu Gao, Lilan He, Lingfei Li, Wei Wang, Hanyuan Yu, and others. Pan-genome analysis of 33 genetically diverse rice accessions reveals the genetic basis of subspecies differentiation and agronomic traits. Molecular Plant, 14(7):1037â1053, 2021.